Gene: Slc39a4 ENSMUSG00000063354

Description

solute carrier family 39 (zinc transporter), member 4 [Source:MGI Symbol;Acc:MGI:1919277]

Gene Synonyms

1600025H15Rik, AWMS2, zip4

Location

Chromosome 15: 76,496,583-76,501,584 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 4 transcripts (splice variants), 203 orthologues, 6 paralogues and is associated with 32 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000230977.2	Slc39a4-204	2750	660aa	ENSMUSP00000155442.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27578	Q78IQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000073428.7	Slc39a4-201	2063	607aa	ENSMUSP00000073134.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2U3TZ56	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230317.2	Slc39a4-203	1035	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000229613.2	Slc39a4-202	379	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Gene: Slc39a4 ENSMUSG00000063354

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Gene: Slc39a4 ENSMUSG00000063354

Summary

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