Gene: Sfta3-ps ENSMUSG00000112343

Description

surfactant associated 3, pseudogene [Source:MGI Symbol;Acc:MGI:2144804]

Gene Synonyms

E030019B13Rik, Nanci

Location

Chromosome 12: 56,535,106-56,576,515 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 40 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000219680.2	Sfta3-ps-204	4774	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000218497.2	Sfta3-ps-202	2653	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000219423.2	Sfta3-ps-203	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000303297.1	Sfta3-ps-226	2649	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244340.1	Sfta3-ps-217	2494	No protein	-	lncRNA	-
ENSMUST00000241144.1	Sfta3-ps-207	2480	No protein	-	lncRNA	-
ENSMUST00000218376.3	Sfta3-ps-201	2451	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241321.1	Sfta3-ps-208	2417	No protein	-	lncRNA	-
ENSMUST00000242002.1	Sfta3-ps-212	2370	No protein	-	lncRNA	-
ENSMUST00000245135.1	Sfta3-ps-221	2346	No protein	-	lncRNA	-
ENSMUST00000244036.1	Sfta3-ps-216	2345	No protein	-	lncRNA	-
ENSMUST00000241715.2	Sfta3-ps-210	2315	No protein	-	lncRNA	-
ENSMUST00000303302.1	Sfta3-ps-231	2311	No protein	-	lncRNA	-
ENSMUST00000242171.1	Sfta3-ps-213	2283	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240836.1	Sfta3-ps-206	2264	No protein	-	lncRNA	-
ENSMUST00000303305.1	Sfta3-ps-234	2245	No protein	-	lncRNA	-
ENSMUST00000243869.1	Sfta3-ps-215	2213	No protein	-	lncRNA	-
ENSMUST00000247117.1	Sfta3-ps-224	2205	No protein	-	lncRNA	-
ENSMUST00000242917.2	Sfta3-ps-214	2198	No protein	-	lncRNA	-
ENSMUST00000241947.1	Sfta3-ps-211	2193	No protein	-	lncRNA	-
ENSMUST00000220379.2	Sfta3-ps-205	2187	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000303301.1	Sfta3-ps-230	2171	No protein	-	lncRNA	-
ENSMUST00000244611.1	Sfta3-ps-218	2129	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241392.1	Sfta3-ps-209	2115	No protein	-	lncRNA	-
ENSMUST00000245149.1	Sfta3-ps-222	2051	No protein	-	lncRNA	-
ENSMUST00000303299.1	Sfta3-ps-228	2029	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000247172.1	Sfta3-ps-225	1954	No protein	-	lncRNA	-
ENSMUST00000244671.1	Sfta3-ps-219	1949	No protein	-	lncRNA	-
ENSMUST00000303300.1	Sfta3-ps-229	1931	No protein	-	lncRNA	-
ENSMUST00000303307.1	Sfta3-ps-235	1872	No protein	-	lncRNA	-
ENSMUST00000303311.1	Sfta3-ps-238	1863	No protein	-	lncRNA	-
ENSMUST00000303298.1	Sfta3-ps-227	1813	No protein	-	lncRNA	-
ENSMUST00000303310.1	Sfta3-ps-237	1793	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000303308.1	Sfta3-ps-236	1773	No protein	-	lncRNA	-
ENSMUST00000245335.2	Sfta3-ps-223	1693	No protein	-	lncRNA	-
ENSMUST00000244991.2	Sfta3-ps-220	1434	No protein	-	lncRNA	-
ENSMUST00000303304.1	Sfta3-ps-233	1121	No protein	-	lncRNA	-
ENSMUST00000303313.1	Sfta3-ps-240	1068	No protein	-	lncRNA	-
ENSMUST00000303303.1	Sfta3-ps-232	1013	No protein	-	lncRNA	-
ENSMUST00000303312.1	Sfta3-ps-239	496	No protein	-	lncRNA	-

Gene: Sfta3-ps ENSMUSG00000112343

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Gene: Sfta3-ps ENSMUSG00000112343

Summary

About Us

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