Gene: Ptprq ENSMUSG00000035916

Description

protein tyrosine phosphatase receptor type Q [Source:MGI Symbol;Acc:MGI:1096349]

Location

Chromosome 10: 107,352,910-107,555,912 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 2 transcripts (splice variants), 133 orthologues, 35 paralogues and is associated with 15 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000050702.9	Ptprq-201	7393	2300aa	ENSMUSP00000058572.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS36051	P0C5E4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000218399.2	Ptprq-202	3415	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,

Gene: Ptprq ENSMUSG00000035916

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Gene: Ptprq ENSMUSG00000035916

Summary

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