Gene: Plppr5 ENSMUSG00000033342

Description

phospholipid phosphatase related 5 [Source:MGI Symbol;Acc:MGI:1923019]

Gene Synonyms

4833424O15Rik, Lppr5

Location

Chromosome 3: 117,278,733-117,483,156 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 4 transcripts (splice variants), 265 orthologues, 9 paralogues and is associated with 49 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000238937.2	Plppr5-203	4798	379aa	ENSMUSP00000159092.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A5F8MPS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000039564.11	Plppr5-201	4670	316aa	ENSMUSP00000045121.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17796	Q8BJ52-2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000106473.5	Plppr5-202	4294	321aa	ENSMUSP00000102081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS80009	Q8BJ52-1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P3: Where the APPRIS core modules are unable to choose a clear principal variant and there more than one of the variants have distinct CCDS identifiers, APPRIS selects the variant with lowest CCDS identifier as the principal variant. The lower the CCDS identifier, the earlier it was annotated. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P3, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000239347.2	Plppr5-204	3653	260aa	ENSMUSP00000159234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A668KM66	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Gene: Plppr5 ENSMUSG00000033342

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Gene: Plppr5 ENSMUSG00000033342

Summary

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