Gene: Nlgn4l ENSMUSG00000121607

Description

neuroligin 4-like [Source:MGI Symbol;Acc:MGI:3775191]

Gene Synonyms

NL-4, NL4, Nlgn4

Location

Chromosome X: 169,067,543-169,089,017 reverse strand.

GRCm39:CM001013.3

About this gene

This gene has 4 transcripts (splice variants), 334 orthologues, 26 paralogues and is associated with 4 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMUST00000249668.2	Nlgn4l-201	3402	606aa	ENSMUSP00000159847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9WUR0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000249671.1	Nlgn4l-204	2345	269aa	ENSMUSP00000159849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AAA9WUT9	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000249669.1	Nlgn4l-202	3733	190aa	ENSMUSP00000159848.1	Nonsense mediated decay	A0AAA9WVY2	-
ENSMUST00000249670.1	Nlgn4l-203	4012	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-

Gene: Nlgn4l ENSMUSG00000121607

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Gene: Nlgn4l ENSMUSG00000121607

Summary

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