Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
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Gene: Med9os ENSMUSG00000085260

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Description

mediator complex subunit 9, opposite strand [Source:MGI Symbol;Acc:MGI:1916628]

Gene Synonyms

1700013G23Rik

Location

Chromosome 11: 59,785,803-59,839,050 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000373139.1	Med9os-204	655	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000373142.1	Med9os-207	974	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000146334.4	Med9os-203	820	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000373141.1	Med9os-206	613	No protein	-	lncRNA		-
ENSMUST00000373140.1	Med9os-205	558	No protein	-	lncRNA		-
ENSMUST00000373143.1	Med9os-208	539	No protein	-	lncRNA		-
ENSMUST00000373144.1	Med9os-209	538	No protein	-	lncRNA		-
ENSMUST00000139794.9	Med9os-202	537	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000373147.1	Med9os-212	472	No protein	-	lncRNA		-
ENSMUST00000129175.9	Med9os-201	435	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000373146.1	Med9os-211	365	No protein	-	lncRNA		-
ENSMUST00000373145.1	Med9os-210	347	No protein	-	lncRNA		-

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Summary

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