Gene: Bbox1 ENSMUSG00000041660

Description

butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) [Source:MGI Symbol;Acc:MGI:1891372]

Location

Chromosome 2: 110,093,042-110,144,905 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 2 transcripts (splice variants), 208 orthologues and is associated with 23 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000046233.9	Bbox1-201	4030	387aa	ENSMUSP00000046302.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS16510	Q924Y0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000133608.2	Bbox1-202	844	145aa	ENSMUSP00000116663.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2AGK3	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Gene: Bbox1 ENSMUSG00000041660

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Gene: Bbox1 ENSMUSG00000041660

Summary

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