Gene: Haglr ENSMUSG00000075277

Description

Hoxd antisense growth associated long non-coding RNA [Source:MGI Symbol;Acc:MGI:3026978]

Gene Synonyms

6720416L17Rik, Mdgt

Location

Chromosome 2: 74,578,766-74,593,293 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 32 transcripts (splice variants), 3 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000100000.4	Haglr-201	2419	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000375756.1	Haglr-211	1847	No protein	-	lncRNA	-
ENSMUST00000375764.1	Haglr-219	1381	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375763.1	Haglr-218	1376	No protein	-	lncRNA	-
ENSMUST00000375765.1	Haglr-220	1314	No protein	-	lncRNA	-
ENSMUST00000375771.1	Haglr-226	1311	No protein	-	lncRNA	-
ENSMUST00000375767.1	Haglr-222	1303	No protein	-	lncRNA	-
ENSMUST00000229136.3	Haglr-203	1289	No protein	-	lncRNA	-
ENSMUST00000230540.3	Haglr-206	1224	No protein	-	lncRNA	-
ENSMUST00000375766.1	Haglr-221	1210	No protein	-	lncRNA	-
ENSMUST00000230704.3	Haglr-207	1207	No protein	-	lncRNA	-
ENSMUST00000375769.1	Haglr-224	1203	No protein	-	lncRNA	-
ENSMUST00000375762.1	Haglr-217	1164	No protein	-	lncRNA	-
ENSMUST00000375772.1	Haglr-227	1127	No protein	-	lncRNA	-
ENSMUST00000230511.3	Haglr-205	1104	No protein	-	lncRNA	-
ENSMUST00000375755.1	Haglr-210	1101	No protein	-	lncRNA	-
ENSMUST00000375757.1	Haglr-212	1097	No protein	-	lncRNA	-
ENSMUST00000375759.1	Haglr-214	1097	No protein	-	lncRNA	-
ENSMUST00000375770.1	Haglr-225	1077	No protein	-	lncRNA	-
ENSMUST00000375753.1	Haglr-208	1075	No protein	-	lncRNA	-
ENSMUST00000152462.4	Haglr-202	1071	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000375754.1	Haglr-209	1059	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000375773.1	Haglr-228	1056	No protein	-	lncRNA	-
ENSMUST00000230341.3	Haglr-204	1041	No protein	-	lncRNA	-
ENSMUST00000375760.1	Haglr-215	1017	No protein	-	lncRNA	-
ENSMUST00000375758.1	Haglr-213	1015	No protein	-	lncRNA	-
ENSMUST00000375768.1	Haglr-223	916	No protein	-	lncRNA	-
ENSMUST00000375761.1	Haglr-216	901	No protein	-	lncRNA	-
ENSMUST00000375777.1	Haglr-232	545	No protein	-	lncRNA	-
ENSMUST00000375775.1	Haglr-230	456	No protein	-	lncRNA	-
ENSMUST00000375774.1	Haglr-229	411	No protein	-	lncRNA	-
ENSMUST00000375776.1	Haglr-231	355	No protein	-	lncRNA	-

Gene: Haglr ENSMUSG00000075277

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Gene: Haglr ENSMUSG00000075277

Summary

About Us

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