Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Phenotypes
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ID History
- Gene history

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Gene: Gm9898 ENSMUSG00000053185

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Description

predicted gene 9898 [Source:MGI Symbol;Acc:MGI:3642391]

Location

Chromosome 1: 30,672,635-30,794,780 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000369087.1	Gm9898-206	964	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369084.1	Gm9898-203	1204	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000065469.3	Gm9898-201	1161	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000369085.1	Gm9898-204	965	No protein	-	lncRNA		-
ENSMUST00000369086.1	Gm9898-205	929	No protein	-	lncRNA		-
ENSMUST00000369083.1	Gm9898-202	907	No protein	-	lncRNA		-
ENSMUST00000369088.1	Gm9898-207	852	No protein	-	lncRNA		-
ENSMUST00000369089.1	Gm9898-208	764	No protein	-	lncRNA		-
ENSMUST00000369090.1	Gm9898-209	761	No protein	-	lncRNA		-
ENSMUST00000369092.1	Gm9898-211	698	No protein	-	lncRNA		-
ENSMUST00000369091.1	Gm9898-210	480	No protein	-	lncRNA		-
ENSMUST00000369093.1	Gm9898-212	416	No protein	-	lncRNA		-

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Summary

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