Summary
- Splice variants
- Transcript comparison
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Gene: Gm7854 ENSMUSG00000085720

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Description

predicted gene 7854 [Source:MGI Symbol;Acc:MGI:3648234]

Gene Synonyms

ENSMUSG00000054483

Location

Chromosome 5: 43,306,203-43,392,804 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000140650.4	Gm7854-201	1075	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000187409.3	Gm7854-202	1433	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000187911.8	Gm7854-203	1237	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000251134.1	Gm7854-206	1216	No protein	-	lncRNA		-
ENSMUST00000251132.1	Gm7854-204	1041	No protein	-	lncRNA		-
ENSMUST00000251137.1	Gm7854-209	1034	No protein	-	lncRNA		-
ENSMUST00000251139.1	Gm7854-211	1025	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251135.1	Gm7854-207	815	No protein	-	lncRNA		-
ENSMUST00000251136.1	Gm7854-208	810	No protein	-	lncRNA		-
ENSMUST00000251138.1	Gm7854-210	801	No protein	-	lncRNA		-
ENSMUST00000251143.1	Gm7854-215	781	No protein	-	lncRNA		-
ENSMUST00000251140.1	Gm7854-212	760	No protein	-	lncRNA		-
ENSMUST00000251141.1	Gm7854-213	759	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251142.1	Gm7854-214	738	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251133.1	Gm7854-205	693	No protein	-	lncRNA		-

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Summary

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