Gene: Gm5547 ENSMUSG00000104835

Description

predicted gene 5547 [Source:MGI Symbol;Acc:MGI:3648206]

Location

Chromosome 3: 105,708,066-105,724,687 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 45 transcripts (splice variants) and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000361597.1	Gm5547-204	1208	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000361603.1	Gm5547-210	1582	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361631.1	Gm5547-238	1526	No protein	-	lncRNA	-
ENSMUST00000361619.1	Gm5547-226	1497	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361630.1	Gm5547-237	1354	No protein	-	lncRNA	-
ENSMUST00000361618.1	Gm5547-225	1242	No protein	-	lncRNA	-
ENSMUST00000361620.1	Gm5547-227	1214	No protein	-	lncRNA	-
ENSMUST00000361632.1	Gm5547-239	1166	No protein	-	lncRNA	-
ENSMUST00000361625.1	Gm5547-232	1100	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000196002.4	Gm5547-201	1041	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000361634.1	Gm5547-241	1039	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361621.1	Gm5547-228	1038	No protein	-	lncRNA	-
ENSMUST00000361599.1	Gm5547-206	1033	No protein	-	lncRNA	-
ENSMUST00000361600.1	Gm5547-207	992	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361623.1	Gm5547-230	978	No protein	-	lncRNA	-
ENSMUST00000361609.1	Gm5547-216	976	No protein	-	lncRNA	-
ENSMUST00000361601.1	Gm5547-208	975	No protein	-	lncRNA	-
ENSMUST00000361627.1	Gm5547-234	964	No protein	-	lncRNA	-
ENSMUST00000361611.1	Gm5547-218	946	No protein	-	lncRNA	-
ENSMUST00000361613.1	Gm5547-220	934	No protein	-	lncRNA	-
ENSMUST00000361605.1	Gm5547-212	920	No protein	-	lncRNA	-
ENSMUST00000361598.1	Gm5547-205	915	No protein	-	lncRNA	-
ENSMUST00000361610.1	Gm5547-217	908	No protein	-	lncRNA	-
ENSMUST00000361608.1	Gm5547-215	906	No protein	-	lncRNA	-
ENSMUST00000361617.1	Gm5547-224	853	No protein	-	lncRNA	-
ENSMUST00000361622.1	Gm5547-229	839	No protein	-	lncRNA	-
ENSMUST00000361602.1	Gm5547-209	805	No protein	-	lncRNA	-
ENSMUST00000361629.1	Gm5547-236	803	No protein	-	lncRNA	-
ENSMUST00000361626.1	Gm5547-233	798	No protein	-	lncRNA	-
ENSMUST00000361633.1	Gm5547-240	781	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000200182.6	Gm5547-203	770	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000361604.1	Gm5547-211	765	No protein	-	lncRNA	-
ENSMUST00000361616.1	Gm5547-223	757	No protein	-	lncRNA	-
ENSMUST00000361607.1	Gm5547-214	730	No protein	-	lncRNA	-
ENSMUST00000361615.1	Gm5547-222	700	No protein	-	lncRNA	-
ENSMUST00000361635.1	Gm5547-242	686	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361612.1	Gm5547-219	684	No protein	-	lncRNA	-
ENSMUST00000361614.1	Gm5547-221	679	No protein	-	lncRNA	-
ENSMUST00000361628.1	Gm5547-235	632	No protein	-	lncRNA	-
ENSMUST00000361624.1	Gm5547-231	623	No protein	-	lncRNA	-
ENSMUST00000361638.1	Gm5547-245	612	No protein	-	lncRNA	-
ENSMUST00000198306.4	Gm5547-202	582	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000361636.1	Gm5547-243	554	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361606.1	Gm5547-213	551	No protein	-	lncRNA	-
ENSMUST00000361637.1	Gm5547-244	481	No protein	-	lncRNA	-

Gene: Gm5547 ENSMUSG00000104835

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Gene: Gm5547 ENSMUSG00000104835

Summary

About Us

Get help

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