Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm5089 ENSMUSG00000115263

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Description

predicted gene 5089 [Source:MGI Symbol;Acc:MGI:3644731]

Gene Synonyms

C030005G22Rik

Location

Chromosome 14: 122,602,641-122,688,636 reverse strand.

GRCm39:CM001007.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000238321.2	Gm5089-203	1668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-
ENSMUST00000379763.1	Gm5089-204	1144	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000081580.3	Gm5089-201	2008	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000379771.1	Gm5089-212	1710	No protein	-	lncRNA		-
ENSMUST00000379768.1	Gm5089-209	1426	No protein	-	lncRNA		-
ENSMUST00000379772.1	Gm5089-213	1413	No protein	-	lncRNA		-
ENSMUST00000379769.1	Gm5089-210	1363	No protein	-	lncRNA		-
ENSMUST00000379767.1	Gm5089-208	1359	No protein	-	lncRNA		-
ENSMUST00000379770.1	Gm5089-211	1328	No protein	-	lncRNA		-
ENSMUST00000228409.2	Gm5089-202	1284	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379775.1	Gm5089-216	1283	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000379765.1	Gm5089-206	1204	No protein	-	lncRNA		-
ENSMUST00000379774.1	Gm5089-215	1173	No protein	-	lncRNA		-
ENSMUST00000379776.1	Gm5089-217	1139	No protein	-	lncRNA		-
ENSMUST00000379773.1	Gm5089-214	1134	No protein	-	lncRNA		-
ENSMUST00000379764.1	Gm5089-205	1108	No protein	-	lncRNA		-
ENSMUST00000379778.1	Gm5089-219	1019	No protein	-	lncRNA		-
ENSMUST00000379766.1	Gm5089-207	999	No protein	-	lncRNA		-
ENSMUST00000379777.1	Gm5089-218	792	No protein	-	lncRNA		-

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Summary

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