Gene: Gm48623 ENSMUSG00000112941

Description

predicted gene, 48623 [Source:MGI Symbol;Acc:MGI:6098220]

Location

Chromosome 13: 54,455,942-54,491,592 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 27 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000331133.1	Gm48623-206	851	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000223430.3	Gm48623-202	1638	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000331134.1	Gm48623-207	1618	No protein	-	lncRNA	-
ENSMUST00000331141.1	Gm48623-214	1415	No protein	-	lncRNA	-
ENSMUST00000331143.1	Gm48623-216	1068	No protein	-	lncRNA	-
ENSMUST00000240905.2	Gm48623-203	1017	No protein	-	lncRNA	-
ENSMUST00000221369.2	Gm48623-201	1004	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000331137.1	Gm48623-210	909	No protein	-	lncRNA	-
ENSMUST00000331140.1	Gm48623-213	862	No protein	-	lncRNA	-
ENSMUST00000331144.1	Gm48623-217	853	No protein	-	lncRNA	-
ENSMUST00000331151.1	Gm48623-224	833	No protein	-	lncRNA	-
ENSMUST00000331135.1	Gm48623-208	813	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331136.1	Gm48623-209	779	No protein	-	lncRNA	-
ENSMUST00000331142.1	Gm48623-215	773	No protein	-	lncRNA	-
ENSMUST00000331150.1	Gm48623-223	742	No protein	-	lncRNA	-
ENSMUST00000243958.2	Gm48623-205	735	No protein	-	lncRNA	-
ENSMUST00000331145.1	Gm48623-218	720	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241959.2	Gm48623-204	718	No protein	-	lncRNA	-
ENSMUST00000331147.1	Gm48623-220	712	No protein	-	lncRNA	-
ENSMUST00000331146.1	Gm48623-219	685	No protein	-	lncRNA	-
ENSMUST00000331139.1	Gm48623-212	683	No protein	-	lncRNA	-
ENSMUST00000331148.1	Gm48623-221	663	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000331152.1	Gm48623-225	663	No protein	-	lncRNA	-
ENSMUST00000331149.1	Gm48623-222	592	No protein	-	lncRNA	-
ENSMUST00000331138.1	Gm48623-211	556	No protein	-	lncRNA	-
ENSMUST00000331153.1	Gm48623-226	542	No protein	-	lncRNA	-
ENSMUST00000331154.1	Gm48623-227	482	No protein	-	lncRNA	-

Gene: Gm48623 ENSMUSG00000112941

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Gene: Gm48623 ENSMUSG00000112941

Summary

About Us

Get help

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