Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
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Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm48284 ENSMUSG00000111504

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Description

predicted gene, 48284 [Source:MGI Symbol;Acc:MGI:6097718]

Location

Chromosome 9: 40,517,712-40,564,929 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000370430.1	Gm48284-202	815	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000216936.3	Gm48284-201	3262	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000370436.1	Gm48284-208	933	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000370434.1	Gm48284-206	780	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000370433.1	Gm48284-205	688	No protein	-	lncRNA		-
ENSMUST00000370437.1	Gm48284-209	686	No protein	-	lncRNA		-
ENSMUST00000370439.1	Gm48284-211	661	No protein	-	lncRNA		-
ENSMUST00000370432.1	Gm48284-204	584	No protein	-	lncRNA		-
ENSMUST00000370438.1	Gm48284-210	572	No protein	-	lncRNA		-
ENSMUST00000370431.1	Gm48284-203	537	No protein	-	lncRNA		-
ENSMUST00000370435.1	Gm48284-207	414	No protein	-	lncRNA		-
ENSMUST00000370440.1	Gm48284-212	287	No protein	-	lncRNA		-

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Summary

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