Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ENSMUSG00000137217

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Description

novel transcript

Location

Chromosome 7: 35,870,699-35,961,990 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000340455.1	-	517	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000340463.1	-	1433	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340464.1	-	1353	No protein	-	lncRNA		-
ENSMUST00000340468.1	-	1251	No protein	-	lncRNA		-
ENSMUST00000340465.1	-	1226	No protein	-	lncRNA		-
ENSMUST00000340470.1	-	1118	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340469.1	-	922	No protein	-	lncRNA		-
ENSMUST00000340461.1	-	898	No protein	-	lncRNA		-
ENSMUST00000340458.1	-	849	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340467.1	-	841	No protein	-	lncRNA		-
ENSMUST00000340460.1	-	797	No protein	-	lncRNA		-
ENSMUST00000340471.1	-	722	No protein	-	lncRNA		-
ENSMUST00000340456.1	-	476	No protein	-	lncRNA		-
ENSMUST00000340472.1	-	409	No protein	-	lncRNA		-
ENSMUST00000340457.1	-	393	No protein	-	lncRNA		-
ENSMUST00000340462.1	-	389	No protein	-	lncRNA		-
ENSMUST00000340459.1	-	341	No protein	-	lncRNA		-
ENSMUST00000340466.1	-	317	No protein	-	lncRNA		-

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Summary

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