Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- GO: Anatomical entity
Phenotypes
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Gene: Gm4489 ENSMUSG00000111952

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Description

predicted gene 4489 [Source:MGI Symbol;Acc:MGI:3782674]

Location

Chromosome 10: 121,932,782-121,967,428 forward strand.

GRCm39:CM001003.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000251093.1	Gm4489-202	1052	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000219576.3	Gm4489-201	1526	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000251096.1	Gm4489-205	1398	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000251095.1	Gm4489-204	1254	No protein	-	lncRNA		-
ENSMUST00000251097.1	Gm4489-206	1198	No protein	-	lncRNA		-
ENSMUST00000251094.1	Gm4489-203	1192	No protein	-	lncRNA		-
ENSMUST00000251103.1	Gm4489-212	1101	No protein	-	lncRNA		-
ENSMUST00000251098.1	Gm4489-207	1046	No protein	-	lncRNA		-
ENSMUST00000251100.1	Gm4489-209	799	No protein	-	lncRNA		-
ENSMUST00000251101.1	Gm4489-210	718	No protein	-	lncRNA		-
ENSMUST00000251104.1	Gm4489-213	644	No protein	-	lncRNA		-
ENSMUST00000251102.1	Gm4489-211	518	No protein	-	lncRNA		-
ENSMUST00000251099.1	Gm4489-208	499	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

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Summary

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