Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm41396 ENSMUSG00000116223

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Description

predicted gene, 41396 [Source:MGI Symbol;Acc:MGI:5624281]

Gene Synonyms

Gm41397

Location

Chromosome 15: 98,815,466-98,849,671 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000320978.1	Gm41396-203	909	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000320984.1	Gm41396-209	1831	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229156.3	Gm41396-201	1620	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320981.1	Gm41396-206	1257	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320980.1	Gm41396-205	1199	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320979.1	Gm41396-204	748	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000320985.1	Gm41396-210	741	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000229635.4	Gm41396-202	736	No protein	-	lncRNA		-
ENSMUST00000320983.1	Gm41396-208	727	No protein	-	lncRNA		-
ENSMUST00000320987.1	Gm41396-212	647	No protein	-	lncRNA		-
ENSMUST00000320982.1	Gm41396-207	635	No protein	-	lncRNA		-
ENSMUST00000320989.1	Gm41396-214	621	No protein	-	lncRNA		-
ENSMUST00000320986.1	Gm41396-211	585	No protein	-	lncRNA		-
ENSMUST00000320988.1	Gm41396-213	568	No protein	-	lncRNA		-
ENSMUST00000320993.1	Gm41396-218	540	No protein	-	lncRNA		-
ENSMUST00000320991.1	Gm41396-216	406	No protein	-	lncRNA		-
ENSMUST00000320990.1	Gm41396-215	391	No protein	-	lncRNA		-
ENSMUST00000320992.1	Gm41396-217	269	No protein	-	lncRNA		-

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Summary

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