Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: Gm41142 ENSMUSG00000121411

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Description

predicted gene, 41142 [Source:MGI Symbol;Acc:MGI:5624027]

Location

Chromosome 14: 45,096,080-45,212,402 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 14 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000127408.3	Gm41142-202	1831	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000228178.2	Gm41142-207	2602	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000099718.11	Gm41142-201	1942	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000228573.2	Gm41142-208	1466	No protein	-	lncRNA		-
ENSMUST00000373579.1	Gm41142-211	1364	No protein	-	lncRNA		-
ENSMUST00000227260.2	Gm41142-204	1326	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000228641.2	Gm41142-209	1204	No protein	-	lncRNA		-
ENSMUST00000227507.2	Gm41142-205	1137	No protein	-	lncRNA		-
ENSMUST00000228852.2	Gm41142-210	1089	No protein	-	lncRNA		-
ENSMUST00000373580.1	Gm41142-212	980	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000227946.3	Gm41142-206	718	No protein	-	lncRNA		-
ENSMUST00000226409.3	Gm41142-203	574	No protein	-	lncRNA		-
ENSMUST00000373582.1	Gm41142-214	501	No protein	-	lncRNA		-
ENSMUST00000373581.1	Gm41142-213	467	No protein	-	lncRNA		-

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Summary

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