Gene: Gm40709 ENSMUSG00000112641

Description

predicted gene, 40709 [Source:MGI Symbol;Acc:MGI:5623594]

Location

Chromosome 10: 78,188,260-78,191,552 forward strand.

GRCm39:CM001003.3

About this gene

This gene has 20 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000220096.3	Gm40709-204	755	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000265930.1	Gm40709-218	1210	No protein	-	lncRNA	-
ENSMUST00000265923.1	Gm40709-211	1055	No protein	-	lncRNA	-
ENSMUST00000265929.1	Gm40709-217	977	No protein	-	lncRNA	-
ENSMUST00000219695.2	Gm40709-203	973	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000219014.3	Gm40709-202	932	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000265920.1	Gm40709-208	932	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265919.1	Gm40709-207	884	No protein	-	lncRNA	-
ENSMUST00000218247.3	Gm40709-201	883	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000265932.1	Gm40709-220	868	No protein	-	lncRNA	-
ENSMUST00000265927.1	Gm40709-215	832	No protein	-	lncRNA	-
ENSMUST00000265917.1	Gm40709-205	804	No protein	-	lncRNA	-
ENSMUST00000265931.1	Gm40709-219	777	No protein	-	lncRNA	-
ENSMUST00000265924.1	Gm40709-212	758	No protein	-	lncRNA	-
ENSMUST00000265926.1	Gm40709-214	738	No protein	-	lncRNA	-
ENSMUST00000265918.1	Gm40709-206	712	No protein	-	lncRNA	-
ENSMUST00000265928.1	Gm40709-216	674	No protein	-	lncRNA	-
ENSMUST00000265925.1	Gm40709-213	670	No protein	-	lncRNA	-
ENSMUST00000265922.1	Gm40709-210	642	No protein	-	lncRNA	-
ENSMUST00000265921.1	Gm40709-209	621	No protein	-	lncRNA	-

Gene: Gm40709 ENSMUSG00000112641

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Gene: Gm40709 ENSMUSG00000112641

Summary

About Us

Get help

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