Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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Gene: Gm40604 ENSMUSG00000112800

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Description

predicted gene, 40604 [Source:MGI Symbol;Acc:MGI:5623489]

Location

Chromosome 10: 15,573,744-15,635,928 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000219541.3	Gm40604-203	888	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000362186.1	Gm40604-210	1157	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362184.1	Gm40604-208	1068	No protein	-	lncRNA		-
ENSMUST00000362185.1	Gm40604-209	1003	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362187.1	Gm40604-211	951	No protein	-	lncRNA		-
ENSMUST00000362180.1	Gm40604-204	926	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000362188.1	Gm40604-212	878	No protein	-	lncRNA		-
ENSMUST00000217765.3	Gm40604-201	730	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000362182.1	Gm40604-206	709	No protein	-	lncRNA		-
ENSMUST00000362191.1	Gm40604-215	609	No protein	-	lncRNA		-
ENSMUST00000362183.1	Gm40604-207	593	No protein	-	lncRNA		-
ENSMUST00000362190.1	Gm40604-214	578	No protein	-	lncRNA		-
ENSMUST00000362181.1	Gm40604-205	566	No protein	-	lncRNA		-
ENSMUST00000218861.2	Gm40604-202	549	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000362189.1	Gm40604-213	518	No protein	-	lncRNA		-

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Summary

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