Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Gm40264 ENSMUSG00000114430

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Description

predicted gene, 40264 [Source:MGI Symbol;Acc:MGI:5623149]

Gene Synonyms

lnc-Crot

Location

Chromosome 5: 9,084,780-9,143,394 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000369121.1	Gm40264-204	564	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000225021.2	Gm40264-202	2663	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000226082.2	Gm40264-203	1365	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369132.1	Gm40264-215	1292	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369125.1	Gm40264-208	853	No protein	-	lncRNA		-
ENSMUST00000369123.1	Gm40264-206	824	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369128.1	Gm40264-211	657	No protein	-	lncRNA		-
ENSMUST00000369127.1	Gm40264-210	634	No protein	-	lncRNA		-
ENSMUST00000369122.1	Gm40264-205	581	No protein	-	lncRNA		-
ENSMUST00000369124.1	Gm40264-207	574	No protein	-	lncRNA		-
ENSMUST00000369129.1	Gm40264-212	531	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369130.1	Gm40264-213	529	No protein	-	lncRNA		-
ENSMUST00000369133.1	Gm40264-216	480	No protein	-	lncRNA		-
ENSMUST00000369126.1	Gm40264-209	464	No protein	-	lncRNA		-
ENSMUST00000369131.1	Gm40264-214	384	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000369134.1	Gm40264-217	383	No protein	-	lncRNA		-
ENSMUST00000224996.2	Gm40264-201	118	No protein	-	lncRNA		-

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Summary

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