Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm39538 ENSMUSG00000129265

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Description

predicted gene, 39538 [Source:MGI Symbol;Acc:MGI:5622423]

Location

Chromosome X: 139,396,146-139,435,257 reverse strand.

GRCm39:CM001013.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000292434.1	Gm39538-201	542	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000292437.1	Gm39538-204	1682	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292438.1	Gm39538-205	1560	No protein	-	lncRNA		-
ENSMUST00000292442.1	Gm39538-209	816	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000292436.1	Gm39538-203	806	No protein	-	lncRNA		-
ENSMUST00000292440.1	Gm39538-207	719	No protein	-	lncRNA		-
ENSMUST00000292441.1	Gm39538-208	580	No protein	-	lncRNA		-
ENSMUST00000292443.1	Gm39538-210	573	No protein	-	lncRNA		-
ENSMUST00000292435.1	Gm39538-202	401	No protein	-	lncRNA		-
ENSMUST00000292444.1	Gm39538-211	368	No protein	-	lncRNA		-
ENSMUST00000292439.1	Gm39538-206	282	No protein	-	lncRNA		-

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Summary

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