Summary
- Splice variants
- Transcript comparison
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Gene: Gm39164 ENSMUSG00000110321

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Description

predicted gene, 39164 [Source:MGI Symbol;Acc:MGI:5622049]

Gene Synonyms

Gm45569

Location

Chromosome 8: 36,630,345-36,643,295 reverse strand.

GRCm39:CM001001.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000210407.3	Gm39164-201	489	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000340039.1	Gm39164-211	1857	No protein	-	lncRNA		-
ENSMUST00000340038.1	Gm39164-210	1002	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000211519.3	Gm39164-202	792	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000340035.1	Gm39164-207	569	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340040.1	Gm39164-212	534	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340032.1	Gm39164-204	474	No protein	-	lncRNA		-
ENSMUST00000340034.1	Gm39164-206	453	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000340036.1	Gm39164-208	420	No protein	-	lncRNA		-
ENSMUST00000340031.1	Gm39164-203	411	No protein	-	lncRNA		-
ENSMUST00000340037.1	Gm39164-209	397	No protein	-	lncRNA		-
ENSMUST00000340033.1	Gm39164-205	343	No protein	-	lncRNA		-

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Summary

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