Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: Gm38843 ENSMUSG00000109556

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Description

predicted gene, 38843 [Source:MGI Symbol;Acc:MGI:5621728]

Gene Synonyms

Gm44884

Location

Chromosome 6: 82,780,690-82,801,480 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000282789.1	Gm38843-202	385	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000282798.1	Gm38843-211	1310	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282804.1	Gm38843-217	882	No protein	-	lncRNA		-
ENSMUST00000282793.1	Gm38843-206	650	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282794.1	Gm38843-207	624	No protein	-	lncRNA		-
ENSMUST00000282791.1	Gm38843-204	595	No protein	-	lncRNA		-
ENSMUST00000282790.1	Gm38843-203	498	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282805.1	Gm38843-218	497	No protein	-	lncRNA		-
ENSMUST00000282792.1	Gm38843-205	494	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000209189.4	Gm38843-201	432	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000282802.1	Gm38843-215	398	No protein	-	lncRNA		-
ENSMUST00000282799.1	Gm38843-212	387	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282796.1	Gm38843-209	359	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282797.1	Gm38843-210	358	No protein	-	lncRNA		-
ENSMUST00000282800.1	Gm38843-213	348	No protein	-	lncRNA		-
ENSMUST00000282803.1	Gm38843-216	312	No protein	-	lncRNA		-
ENSMUST00000282795.1	Gm38843-208	311	No protein	-	lncRNA		-
ENSMUST00000282801.1	Gm38843-214	308	No protein	-	lncRNA		-

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Summary

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