Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: Gm33680 ENSMUSG00000112054

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Description

predicted gene, 33680 [Source:MGI Symbol;Acc:MGI:5592839]

Location

Chromosome 12: 45,492,829-45,701,656 forward strand.

GRCm39:CM001005.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000314972.1	Gm33680-204	946	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000219610.2	Gm33680-203	4117	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000219411.2	Gm33680-202	3401	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000314973.1	Gm33680-205	1392	No protein	-	lncRNA		-
ENSMUST00000314976.1	Gm33680-208	1253	No protein	-	lncRNA		-
ENSMUST00000314977.1	Gm33680-209	1238	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314979.1	Gm33680-211	1232	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314980.1	Gm33680-212	1115	No protein	-	lncRNA		-
ENSMUST00000314978.1	Gm33680-210	1092	No protein	-	lncRNA		-
ENSMUST00000314974.1	Gm33680-206	829	No protein	-	lncRNA		-
ENSMUST00000314982.1	Gm33680-214	802	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000314983.1	Gm33680-215	773	No protein	-	lncRNA		-
ENSMUST00000314975.1	Gm33680-207	707	No protein	-	lncRNA		-
ENSMUST00000314981.1	Gm33680-213	698	No protein	-	lncRNA		-
ENSMUST00000314984.1	Gm33680-216	623	No protein	-	lncRNA		-
ENSMUST00000219336.2	Gm33680-201	576	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000314985.1	Gm33680-217	552	No protein	-	lncRNA		-

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Summary

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