Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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Molecular interactions
External references
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ID History
- Gene history

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Gene: Gm33340 ENSMUSG00000112407

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Description

predicted gene, 33340 [Source:MGI Symbol;Acc:MGI:5592499]

Gene Synonyms

Gm40882

Location

Chromosome 12: 43,013,648-43,081,074 reverse strand.

GRCm39:CM001005.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000265600.1	Gm33340-204	808	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000265605.1	Gm33340-209	934	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265603.1	Gm33340-207	861	No protein	-	lncRNA		-
ENSMUST00000265608.1	Gm33340-212	839	No protein	-	lncRNA		-
ENSMUST00000265606.1	Gm33340-210	827	No protein	-	lncRNA		-
ENSMUST00000265604.1	Gm33340-208	789	No protein	-	lncRNA		-
ENSMUST00000265607.1	Gm33340-211	713	No protein	-	lncRNA		-
ENSMUST00000265601.1	Gm33340-205	712	No protein	-	lncRNA		-
ENSMUST00000265602.1	Gm33340-206	711	No protein	-	lncRNA		-
ENSMUST00000219475.3	Gm33340-201	623	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000219846.2	Gm33340-202	578	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000220044.2	Gm33340-203	284	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Summary

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