Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: Gm30173 ENSMUSG00000103965

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Description

predicted gene, 30173 [Source:MGI Symbol;Acc:MGI:5589332]

Location

Chromosome 3: 52,410,191-52,457,642 forward strand.

GRCm39:CM000996.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000381405.1	Gm30173-202	785	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000381414.1	Gm30173-211	2229	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381417.1	Gm30173-214	1585	No protein	-	lncRNA		-
ENSMUST00000381410.1	Gm30173-207	1488	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381416.1	Gm30173-213	1457	No protein	-	lncRNA		-
ENSMUST00000381406.1	Gm30173-203	1206	No protein	-	lncRNA		-
ENSMUST00000381412.1	Gm30173-209	1173	No protein	-	lncRNA		-
ENSMUST00000195035.2	Gm30173-201	1128	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000381413.1	Gm30173-210	1127	No protein	-	lncRNA		-
ENSMUST00000381409.1	Gm30173-206	1023	No protein	-	lncRNA		-
ENSMUST00000381408.1	Gm30173-205	1014	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000381411.1	Gm30173-208	970	No protein	-	lncRNA		-
ENSMUST00000381415.1	Gm30173-212	783	No protein	-	lncRNA		-
ENSMUST00000381419.1	Gm30173-216	763	No protein	-	lncRNA		-
ENSMUST00000381407.1	Gm30173-204	711	No protein	-	lncRNA		-
ENSMUST00000381418.1	Gm30173-215	525	No protein	-	lncRNA		-

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Summary

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