Gene: Gm28578 ENSMUSG00000100417

Description

predicted gene 28578 [Source:MGI Symbol;Acc:MGI:5579284]

Location

Chromosome 19: 45,288,411-45,326,930 reverse strand.

GRCm39:CM001012.3

About this gene

This gene has 57 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000244351.2	Gm28578-214	536	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000187727.3	Gm28578-202	2730	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000189196.2	Gm28578-205	1470	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000187954.4	Gm28578-204	1355	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000236436.2	Gm28578-209	1268	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269927.1	Gm28578-255	1191	No protein	-	lncRNA	-
ENSMUST00000235789.2	Gm28578-208	1135	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269907.1	Gm28578-235	1098	No protein	-	lncRNA	-
ENSMUST00000269910.1	Gm28578-238	1042	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000235311.4	Gm28578-207	1040	No protein	-	lncRNA	-
ENSMUST00000269917.1	Gm28578-245	1000	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269913.1	Gm28578-241	999	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269914.1	Gm28578-242	984	No protein	-	lncRNA	-
ENSMUST00000269928.1	Gm28578-256	972	No protein	-	lncRNA	-
ENSMUST00000269892.1	Gm28578-220	955	No protein	-	lncRNA	-
ENSMUST00000269909.1	Gm28578-237	951	No protein	-	lncRNA	-
ENSMUST00000269908.1	Gm28578-236	872	No protein	-	lncRNA	-
ENSMUST00000269890.1	Gm28578-218	837	No protein	-	lncRNA	-
ENSMUST00000269916.1	Gm28578-244	834	No protein	-	lncRNA	-
ENSMUST00000269891.1	Gm28578-219	829	No protein	-	lncRNA	-
ENSMUST00000236811.2	Gm28578-210	797	No protein	-	lncRNA	-
ENSMUST00000269898.1	Gm28578-226	796	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269912.1	Gm28578-240	795	No protein	-	lncRNA	-
ENSMUST00000189827.4	Gm28578-206	751	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000269904.1	Gm28578-232	750	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000187795.3	Gm28578-203	749	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000269911.1	Gm28578-239	747	No protein	-	lncRNA	-
ENSMUST00000269925.1	Gm28578-253	744	No protein	-	lncRNA	-
ENSMUST00000269896.1	Gm28578-224	731	No protein	-	lncRNA	-
ENSMUST00000269895.1	Gm28578-223	722	No protein	-	lncRNA	-
ENSMUST00000186981.5	Gm28578-201	713	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000269902.1	Gm28578-230	704	No protein	-	lncRNA	-
ENSMUST00000269920.1	Gm28578-248	702	No protein	-	lncRNA	-
ENSMUST00000269924.1	Gm28578-252	689	No protein	-	lncRNA	-
ENSMUST00000269903.1	Gm28578-231	686	No protein	-	lncRNA	-
ENSMUST00000238044.2	Gm28578-211	678	No protein	-	lncRNA	-
ENSMUST00000244410.2	Gm28578-215	647	No protein	-	lncRNA	-
ENSMUST00000269889.1	Gm28578-217	644	No protein	-	lncRNA	-
ENSMUST00000269922.1	Gm28578-250	643	No protein	-	lncRNA	-
ENSMUST00000241284.2	Gm28578-212	584	No protein	-	lncRNA	-
ENSMUST00000269897.1	Gm28578-225	578	No protein	-	lncRNA	-
ENSMUST00000269894.1	Gm28578-222	571	No protein	-	lncRNA	-
ENSMUST00000241992.2	Gm28578-213	543	No protein	-	lncRNA	-
ENSMUST00000269893.1	Gm28578-221	537	No protein	-	lncRNA	-
ENSMUST00000269918.1	Gm28578-246	534	No protein	-	lncRNA	-
ENSMUST00000269929.1	Gm28578-257	534	No protein	-	lncRNA	-
ENSMUST00000269905.1	Gm28578-233	531	No protein	-	lncRNA	-
ENSMUST00000269926.1	Gm28578-254	529	No protein	-	lncRNA	-
ENSMUST00000269899.1	Gm28578-227	526	No protein	-	lncRNA	-
ENSMUST00000269906.1	Gm28578-234	524	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000269919.1	Gm28578-247	521	No protein	-	lncRNA	-
ENSMUST00000269900.1	Gm28578-228	515	No protein	-	lncRNA	-
ENSMUST00000269888.1	Gm28578-216	465	No protein	-	lncRNA	-
ENSMUST00000269901.1	Gm28578-229	427	No protein	-	lncRNA	-
ENSMUST00000269923.1	Gm28578-251	413	No protein	-	lncRNA	-
ENSMUST00000269915.1	Gm28578-243	376	No protein	-	lncRNA	-
ENSMUST00000269921.1	Gm28578-249	353	No protein	-	lncRNA	-

Gene: Gm28578 ENSMUSG00000100417

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Gene: Gm28578 ENSMUSG00000100417

Summary

About Us

Get help

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