Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
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ID History
- Gene history

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Gene: Gm28513 ENSMUSG00000099568

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Description

predicted gene 28513 [Source:MGI Symbol;Acc:MGI:5579219]

Location

Chromosome 1: 153,596,986-153,625,070 reverse strand.

GRCm39:CM000994.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000282108.1	Gm28513-203	2169	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000190663.2	Gm28513-201	3337	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000282109.1	Gm28513-204	1476	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000282110.1	Gm28513-205	1418	No protein	-	lncRNA		-
ENSMUST00000282111.1	Gm28513-206	1399	No protein	-	lncRNA		-
ENSMUST00000282115.1	Gm28513-210	1310	No protein	-	lncRNA		-
ENSMUST00000282112.1	Gm28513-207	1203	No protein	-	lncRNA		-
ENSMUST00000282117.1	Gm28513-212	1159	No protein	-	lncRNA		-
ENSMUST00000282116.1	Gm28513-211	1121	No protein	-	lncRNA		-
ENSMUST00000282113.1	Gm28513-208	1070	No protein	-	lncRNA		-
ENSMUST00000282118.1	Gm28513-213	1060	No protein	-	lncRNA		-
ENSMUST00000282114.1	Gm28513-209	1013	No protein	-	lncRNA		-
ENSMUST00000282123.1	Gm28513-218	928	No protein	-	lncRNA		-
ENSMUST00000282121.1	Gm28513-216	830	No protein	-	lncRNA		-
ENSMUST00000282120.1	Gm28513-215	770	No protein	-	lncRNA		-
ENSMUST00000282122.1	Gm28513-217	714	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000191474.2	Gm28513-202	613	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000282119.1	Gm28513-214	597	No protein	-	lncRNA		-
ENSMUST00000282124.1	Gm28513-219	547	No protein	-	lncRNA		-

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Summary

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