Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: Gm28050 ENSMUSG00000099061

.

Description

predicted gene, 28050 [Source:MGI Symbol;Acc:MGI:5547786]

Location

Chromosome 5: 106,648,759-106,753,983 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 15 transcripts (splice variants) and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000309043.1	Gm28050-203	613	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000309047.1	Gm28050-207	1588	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309048.1	Gm28050-208	1318	No protein	-	lncRNA		-
ENSMUST00000309044.1	Gm28050-204	1206	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309053.1	Gm28050-213	887	No protein	-	lncRNA		-
ENSMUST00000309045.1	Gm28050-205	772	No protein	-	lncRNA		-
ENSMUST00000131029.4	Gm28050-202	703	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000309046.1	Gm28050-206	656	No protein	-	lncRNA		-
ENSMUST00000309052.1	Gm28050-212	643	No protein	-	lncRNA		-
ENSMUST00000309050.1	Gm28050-210	622	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309054.1	Gm28050-214	555	No protein	-	lncRNA		-
ENSMUST00000309051.1	Gm28050-211	551	No protein	-	lncRNA		-
ENSMUST00000124394.4	Gm28050-201	548	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000309049.1	Gm28050-209	421	No protein	-	lncRNA		-
ENSMUST00000309055.1	Gm28050-215	352	No protein	-	lncRNA		-

.

Summary

.

.