Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Gene gain/loss tree
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Ontologies
- GO: Anatomical entity
Phenotypes
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Gene: Gm26839 ENSMUSG00000097917

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Description

predicted gene, 26839 [Source:MGI Symbol;Acc:MGI:5477333]

Location

Chromosome 12: 99,529,275-99,587,325 forward strand.

GRCm39:CM001005.3

About this gene

This gene has 15 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000180686.3	Gm26839-201	2040	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000262582.1	Gm26839-210	1864	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000262585.1	Gm26839-213	1180	No protein	-	lncRNA		-
ENSMUST00000262583.1	Gm26839-211	1151	No protein	-	lncRNA		-
ENSMUST00000262586.1	Gm26839-214	1125	No protein	-	lncRNA		-
ENSMUST00000262580.1	Gm26839-208	1076	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000262578.1	Gm26839-206	1060	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000262576.1	Gm26839-204	1034	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000262584.1	Gm26839-212	922	No protein	-	lncRNA		-
ENSMUST00000262577.1	Gm26839-205	845	No protein	-	lncRNA		-
ENSMUST00000262587.1	Gm26839-215	842	No protein	-	lncRNA		-
ENSMUST00000262575.1	Gm26839-203	831	No protein	-	lncRNA		-
ENSMUST00000262579.1	Gm26839-207	806	No protein	-	lncRNA		-
ENSMUST00000262581.1	Gm26839-209	722	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000222797.2	Gm26839-202	566	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

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Summary

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