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- Transcript comparison
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Gene: Gm16556 ENSMUSG00000090192

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Description

predicted gene 16556 [Source:MGI Symbol;Acc:MGI:4414976]

Location

Chromosome 6: 122,536,999-122,548,396 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000312913.1	Gm16556-204	584	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000312918.1	Gm16556-209	2431	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000312917.1	Gm16556-208	2094	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000312919.1	Gm16556-210	1710	No protein	-	lncRNA		-
ENSMUST00000312921.1	Gm16556-212	1369	No protein	-	lncRNA		-
ENSMUST00000312920.1	Gm16556-211	994	No protein	-	lncRNA		-
ENSMUST00000312915.1	Gm16556-206	734	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245103.2	Gm16556-203	598	No protein	-	lncRNA		-
ENSMUST00000162608.4	Gm16556-201	572	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000162980.4	Gm16556-202	503	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000312916.1	Gm16556-207	456	No protein	-	lncRNA		-
ENSMUST00000312914.1	Gm16556-205	366	No protein	-	lncRNA		-

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Summary

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