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- Splice variants
- Transcript comparison
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Gene: 9230111E07Rik ENSMUSG00000087624

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Description

RIKEN cDNA 9230111E07 gene [Source:MGI Symbol;Acc:MGI:1924998]

Location

Chromosome 2: 167,619,384-167,638,207 forward strand.

GRCm39:CM000995.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000308271.1	9230111E07Rik-204	763	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000308282.1	9230111E07Rik-215	1729	No protein	-	lncRNA		-
ENSMUST00000308274.1	9230111E07Rik-207	1480	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000308279.1	9230111E07Rik-212	1479	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000308278.1	9230111E07Rik-211	1368	No protein	-	lncRNA		-
ENSMUST00000308276.1	9230111E07Rik-209	1255	No protein	-	lncRNA		-
ENSMUST00000308574.1	9230111E07Rik-219	1200	No protein	-	lncRNA		-
ENSMUST00000308272.1	9230111E07Rik-205	1068	No protein	-	lncRNA		-
ENSMUST00000308277.1	9230111E07Rik-210	926	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000308275.1	9230111E07Rik-208	857	No protein	-	lncRNA		-
ENSMUST00000124850.2	9230111E07Rik-201	811	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000139927.3	9230111E07Rik-203	658	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000127441.2	9230111E07Rik-202	632	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000308573.1	9230111E07Rik-218	588	No protein	-	lncRNA		-
ENSMUST00000308280.1	9230111E07Rik-213	511	No protein	-	lncRNA		-
ENSMUST00000308273.1	9230111E07Rik-206	453	No protein	-	lncRNA		-
ENSMUST00000308284.1	9230111E07Rik-217	384	No protein	-	lncRNA		-
ENSMUST00000308283.1	9230111E07Rik-216	366	No protein	-	lncRNA		-
ENSMUST00000308281.1	9230111E07Rik-214	311	No protein	-	lncRNA		-

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Summary

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