Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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Phenotypes
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Gene: Gm12996 ENSMUSG00000086417

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Description

predicted gene 12996 [Source:MGI Symbol;Acc:MGI:3650481]

Location

Chromosome 4: 116,681,412-116,710,562 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 10 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000294652.1	Gm12996-208	998	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000151670.3	Gm12996-201	2115	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000294654.1	Gm12996-210	1195	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000294647.1	Gm12996-203	1104	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000294646.1	Gm12996-202	919	No protein	-	lncRNA		-
ENSMUST00000294653.1	Gm12996-209	912	No protein	-	lncRNA		-
ENSMUST00000294648.1	Gm12996-204	761	No protein	-	lncRNA		-
ENSMUST00000294649.1	Gm12996-205	680	No protein	-	lncRNA		-
ENSMUST00000294650.1	Gm12996-206	595	No protein	-	lncRNA		-
ENSMUST00000294651.1	Gm12996-207	415	No protein	-	lncRNA		-

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Summary

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