Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: Gm12976 ENSMUSG00000087575

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Description

predicted gene 12976 [Source:MGI Symbol;Acc:MGI:3650499]

Location

Chromosome 4: 129,133,049-129,180,936 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000316412.1	Gm12976-210	1200	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000316407.1	Gm12976-205	1377	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000150171.3	Gm12976-201	1235	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000316419.1	Gm12976-217	1114	No protein	-	lncRNA		-
ENSMUST00000316417.1	Gm12976-215	1085	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000316415.1	Gm12976-213	1068	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000316416.1	Gm12976-214	1042	No protein	-	lncRNA		-
ENSMUST00000316414.1	Gm12976-212	926	No protein	-	lncRNA		-
ENSMUST00000316413.1	Gm12976-211	867	No protein	-	lncRNA		-
ENSMUST00000316420.1	Gm12976-218	826	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000153817.9	Gm12976-202	701	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000316406.1	Gm12976-204	688	No protein	-	lncRNA		-
ENSMUST00000316409.1	Gm12976-207	655	No protein	-	lncRNA		-
ENSMUST00000316411.1	Gm12976-209	588	No protein	-	lncRNA		-
ENSMUST00000316418.1	Gm12976-216	566	No protein	-	lncRNA		-
ENSMUST00000316408.1	Gm12976-206	557	No protein	-	lncRNA		-
ENSMUST00000316405.1	Gm12976-203	537	No protein	-	lncRNA		-
ENSMUST00000316410.1	Gm12976-208	448	No protein	-	lncRNA		-

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Summary

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