Summary
- Splice variants
- Transcript comparison
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Gene: Gm12781 ENSMUSG00000085923

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Description

predicted gene 12781 [Source:MGI Symbol;Acc:MGI:3649569]

Location

Chromosome 7: 34,352,609-34,363,236 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 13 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000146269.3	Gm12781-201	658	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000243345.2	Gm12781-202	1387	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000353331.1	Gm12781-205	1270	No protein	-	lncRNA		-
ENSMUST00000243493.2	Gm12781-203	1251	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000353333.1	Gm12781-207	849	No protein	-	lncRNA		-
ENSMUST00000245287.2	Gm12781-204	728	No protein	-	lncRNA		-
ENSMUST00000353338.1	Gm12781-212	610	No protein	-	lncRNA		-
ENSMUST00000353339.1	Gm12781-213	600	No protein	-	lncRNA		-
ENSMUST00000353337.1	Gm12781-211	539	No protein	-	lncRNA		-
ENSMUST00000353332.1	Gm12781-206	537	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000353334.1	Gm12781-208	521	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000353335.1	Gm12781-209	458	No protein	-	lncRNA		-
ENSMUST00000353336.1	Gm12781-210	330	No protein	-	lncRNA		-

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Summary

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