Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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Gene: Gm11650 ENSMUSG00000087184

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Description

predicted gene 11650 [Source:MGI Symbol;Acc:MGI:3650132]

Location

Chromosome 11: 107,684,286-107,687,204 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 11 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000141271.4	Gm11650-201	1634	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000317942.1	Gm11650-209	1648	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243519.2	Gm11650-202	1610	No protein	-	lncRNA		-
ENSMUST00000317940.1	Gm11650-207	1366	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317941.1	Gm11650-208	1337	No protein	-	lncRNA		-
ENSMUST00000317936.1	Gm11650-203	1265	No protein	-	lncRNA		-
ENSMUST00000317943.1	Gm11650-210	1234	No protein	-	lncRNA		-
ENSMUST00000317944.1	Gm11650-211	1093	No protein	-	lncRNA		-
ENSMUST00000317938.1	Gm11650-205	300	No protein	-	lncRNA		-
ENSMUST00000317939.1	Gm11650-206	297	No protein	-	lncRNA		-
ENSMUST00000317937.1	Gm11650-204	296	No protein	-	lncRNA		-

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Summary

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