predicted gene 10509 [Source:MGI Symbol;Acc:MGI:3796835]
Chromosome 17: 21,898,710-21,911,950 forward strand.
GRCm39:CM001010.3
This gene has 9 transcripts (splice variants), 13 orthologues and 13 paralogues.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | Flags |
|---|---|---|---|---|---|---|---|
| ENSMUST00000249264.1 | Gm10509-204 | 8735 | 723aa | ENSMUSP00000159642.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, | |
| ENSMUST00000249261.1 | Gm10509-201 | 3538 | 723aa | ENSMUSP00000159640.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, | |
| ENSMUST00000249269.1 | Gm10509-209 | 3340 | 723aa | ENSMUSP00000159646.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, | |
| ENSMUST00000249263.1 | Gm10509-203 | 3047 | 723aa | ENSMUSP00000159641.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, | |
| ENSMUST00000249266.1 | Gm10509-206 | 2905 | 723aa | ENSMUSP00000159643.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, | |
| ENSMUST00000249268.1 | Gm10509-208 | 2747 | 682aa | ENSMUSP00000159645.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000249267.1 | Gm10509-207 | 2593 | 702aa | ENSMUSP00000159644.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENSMUST00000249262.1 | Gm10509-202 | 758 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - | |
| ENSMUST00000249265.1 | Gm10509-205 | 599 | No protein | - | Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined | - |
