Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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Gene: Mir223hg ENSMUSG00000078122

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Description

Mir223 host gene [Source:MGI Symbol;Acc:MGI:3641813]

Gene Synonyms

ENSMUSG00000065522, F630028O10Rik, Gm14924, lnc15847

Location

Chromosome X: 95,283,390-95,287,267 forward strand.

GRCm39:CM001013.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000242067.2	Mir223hg-205	1193	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000147681.4	Mir223hg-202	3433	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000133125.5	Mir223hg-201	2904	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000299827.1	Mir223hg-217	1418	No protein	-	lncRNA		-
ENSMUST00000299823.1	Mir223hg-213	1345	No protein	-	lncRNA		-
ENSMUST00000299826.1	Mir223hg-216	1284	No protein	-	lncRNA		-
ENSMUST00000299824.1	Mir223hg-214	1264	No protein	-	lncRNA		-
ENSMUST00000299818.1	Mir223hg-208	1262	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000243309.2	Mir223hg-206	1254	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241454.2	Mir223hg-204	1208	No protein	-	lncRNA		-
ENSMUST00000299821.1	Mir223hg-211	1156	No protein	-	lncRNA		-
ENSMUST00000299825.1	Mir223hg-215	1133	No protein	-	lncRNA		-
ENSMUST00000299822.1	Mir223hg-212	1125	No protein	-	lncRNA		-
ENSMUST00000299819.1	Mir223hg-209	1059	No protein	-	lncRNA		-
ENSMUST00000299817.1	Mir223hg-207	1037	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000240894.2	Mir223hg-203	925	No protein	-	lncRNA		-
ENSMUST00000299820.1	Mir223hg-210	593	No protein	-	lncRNA		-

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Summary

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