Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: A430102A20Rik ENSMUSG00000136644

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Description

RIKEN cDNA A430102A20 gene [Source:MGI Symbol;Acc:MGI:1925174]

Location

Chromosome 11: 120,823,290-120,824,644 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000336953.1	A430102A20Rik-201	1044	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336954.1	A430102A20Rik-202	751	No protein	-	lncRNA		-
ENSMUST00000336961.1	A430102A20Rik-209	662	No protein	-	lncRNA		-
ENSMUST00000336963.1	A430102A20Rik-211	589	No protein	-	lncRNA		-
ENSMUST00000336959.1	A430102A20Rik-207	567	No protein	-	lncRNA		-
ENSMUST00000336955.1	A430102A20Rik-203	552	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336958.1	A430102A20Rik-206	546	No protein	-	lncRNA		-
ENSMUST00000336956.1	A430102A20Rik-204	524	No protein	-	lncRNA		-
ENSMUST00000336957.1	A430102A20Rik-205	439	No protein	-	lncRNA		-
ENSMUST00000336962.1	A430102A20Rik-210	358	No protein	-	lncRNA		-
ENSMUST00000336960.1	A430102A20Rik-208	354	No protein	-	lncRNA		-

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Summary

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