Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: ENSMUSG00000136178

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Description

novel transcript, antisense to RP24-472I15.1

Location

Chromosome 5: 98,627,618-98,661,123 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000334598.1	-	670	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000334600.1	-	944	No protein	-	lncRNA		-
ENSMUST00000334603.1	-	652	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334599.1	-	613	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334607.1	-	555	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334604.1	-	533	No protein	-	lncRNA		-
ENSMUST00000334612.1	-	519	No protein	-	lncRNA		-
ENSMUST00000334602.1	-	502	No protein	-	lncRNA		-
ENSMUST00000334601.1	-	488	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000334609.1	-	488	No protein	-	lncRNA		-
ENSMUST00000334608.1	-	471	No protein	-	lncRNA		-
ENSMUST00000334611.1	-	469	No protein	-	lncRNA		-
ENSMUST00000334610.1	-	439	No protein	-	lncRNA		-
ENSMUST00000334606.1	-	435	No protein	-	lncRNA		-
ENSMUST00000334605.1	-	382	No protein	-	lncRNA		-
ENSMUST00000334613.1	-	381	No protein	-	lncRNA		-

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Summary

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