Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm38872 ENSMUSG00000132047

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Description

predicted gene, 38872 [Source:MGI Symbol;Acc:MGI:5621757]

Location

Chromosome 6: 108,175,099-108,193,081 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000309829.1	Gm38872-212	383	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000309820.1	Gm38872-203	1305	No protein	-	lncRNA		-
ENSMUST00000309822.1	Gm38872-205	1108	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309821.1	Gm38872-204	1005	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309824.1	Gm38872-207	946	No protein	-	lncRNA		-
ENSMUST00000309823.1	Gm38872-206	907	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309825.1	Gm38872-208	792	No protein	-	lncRNA		-
ENSMUST00000309819.1	Gm38872-202	630	No protein	-	lncRNA		-
ENSMUST00000309828.1	Gm38872-211	511	No protein	-	lncRNA		-
ENSMUST00000309826.1	Gm38872-209	466	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000309827.1	Gm38872-210	420	No protein	-	lncRNA		-
ENSMUST00000309818.1	Gm38872-201	379	No protein	-	lncRNA		-

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Summary

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