Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- GO: Anatomical entity
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Gene: AV205837 ENSMUSG00000116973

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Description

expressed sequence AV205837 [Source:MGI Symbol;Acc:MGI:2146600]

Location

Chromosome 16: 31,144,037-31,157,929 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 7 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000254885.1	AV205837-202	628	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000254888.1	AV205837-205	1253	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231745.3	AV205837-201	1206	No protein	-	lncRNA		-
ENSMUST00000254889.1	AV205837-206	755	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254890.1	AV205837-207	704	No protein	-	lncRNA		-
ENSMUST00000254886.1	AV205837-203	496	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000254887.1	AV205837-204	359	No protein	-	lncRNA		-

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Summary

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