Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: 4930477N07Rik ENSMUSG00000112155

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Description

RIKEN cDNA 4930477N07 gene [Source:MGI Symbol;Acc:MGI:1922155]

Location

Chromosome 10: 119,098,288-119,218,813 forward strand.

GRCm39:CM001003.3

About this gene

This gene has 16 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000218762.3	4930477N07Rik-201	927	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000317311.1	4930477N07Rik-202	922	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317312.1	4930477N07Rik-203	919	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317320.1	4930477N07Rik-211	786	No protein	-	lncRNA		-
ENSMUST00000317314.1	4930477N07Rik-205	725	No protein	-	lncRNA		-
ENSMUST00000317318.1	4930477N07Rik-209	718	No protein	-	lncRNA		-
ENSMUST00000317319.1	4930477N07Rik-210	714	No protein	-	lncRNA		-
ENSMUST00000317322.1	4930477N07Rik-213	712	No protein	-	lncRNA		-
ENSMUST00000317316.1	4930477N07Rik-207	671	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317321.1	4930477N07Rik-212	651	No protein	-	lncRNA		-
ENSMUST00000317313.1	4930477N07Rik-204	598	No protein	-	lncRNA		-
ENSMUST00000317324.1	4930477N07Rik-215	516	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000317325.1	4930477N07Rik-216	495	No protein	-	lncRNA		-
ENSMUST00000317315.1	4930477N07Rik-206	476	No protein	-	lncRNA		-
ENSMUST00000317323.1	4930477N07Rik-214	434	No protein	-	lncRNA		-
ENSMUST00000317317.1	4930477N07Rik-208	383	No protein	-	lncRNA		-

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Summary

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