Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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- GO: Anatomical entity
Phenotypes
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ID History
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Gene: Gm44140 ENSMUSG00000107702

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Description

predicted gene, 44140 [Source:MGI Symbol;Acc:MGI:5690532]

Location

Chromosome 6: 136,459,973-136,496,085 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 17 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000275641.1	Gm44140-202	442	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000275653.1	Gm44140-214	1866	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000275644.1	Gm44140-205	854	No protein	-	lncRNA		-
ENSMUST00000275645.1	Gm44140-206	817	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000275654.1	Gm44140-215	786	No protein	-	lncRNA		-
ENSMUST00000275655.1	Gm44140-216	722	No protein	-	lncRNA		-
ENSMUST00000275646.1	Gm44140-207	713	No protein	-	lncRNA		-
ENSMUST00000275647.1	Gm44140-208	688	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000204157.2	Gm44140-201	675	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000275649.1	Gm44140-210	669	No protein	-	lncRNA		-
ENSMUST00000275642.1	Gm44140-203	540	No protein	-	lncRNA		-
ENSMUST00000275651.1	Gm44140-212	524	No protein	-	lncRNA		-
ENSMUST00000275656.1	Gm44140-217	520	No protein	-	lncRNA		-
ENSMUST00000275643.1	Gm44140-204	484	No protein	-	lncRNA		-
ENSMUST00000275652.1	Gm44140-213	468	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000275650.1	Gm44140-211	410	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000275648.1	Gm44140-209	378	No protein	-	lncRNA		-

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Summary

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