Summary
- Splice variants
- Transcript comparison
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ID History
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Gene: 1700018A23Rik ENSMUSG00000107368

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Description

RIKEN cDNA 1700018A23 gene [Source:MGI Symbol;Acc:MGI:1919481]

Gene Synonyms

Gm42574

Location

Chromosome 6: 126,785,260-126,802,396 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 11 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000297821.1	1700018A23Rik-202	1180	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000201350.3	1700018A23Rik-201	1545	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000297827.1	1700018A23Rik-208	897	No protein	-	lncRNA		-
ENSMUST00000297824.1	1700018A23Rik-205	812	No protein	-	lncRNA		-
ENSMUST00000297825.1	1700018A23Rik-206	593	No protein	-	lncRNA		-
ENSMUST00000297822.1	1700018A23Rik-203	565	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000297823.1	1700018A23Rik-204	460	No protein	-	lncRNA		-
ENSMUST00000297826.1	1700018A23Rik-207	456	No protein	-	lncRNA		-
ENSMUST00000297828.1	1700018A23Rik-209	438	No protein	-	lncRNA		-
ENSMUST00000297829.1	1700018A23Rik-210	416	No protein	-	lncRNA		-
ENSMUST00000297830.1	1700018A23Rik-211	205	No protein	-	lncRNA		-

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Summary

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