Gene: Gm42654 ENSMUSG00000107141

Description

predicted gene 42654 [Source:MGI Symbol;Acc:MGI:5662791]

Location

Chromosome 5: 120,477,554-120,548,229 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 53 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000339204.1	Gm42654-203	529	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000339242.1	Gm42654-241	1148	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339240.1	Gm42654-239	1127	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339225.1	Gm42654-224	786	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000201741.3	Gm42654-202	702	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000200789.3	Gm42654-201	685	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000339220.1	Gm42654-219	649	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339245.1	Gm42654-244	645	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339217.1	Gm42654-216	612	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339230.1	Gm42654-229	591	No protein	-	lncRNA	-
ENSMUST00000339227.1	Gm42654-226	559	No protein	-	lncRNA	-
ENSMUST00000339229.1	Gm42654-228	536	No protein	-	lncRNA	-
ENSMUST00000339253.1	Gm42654-252	525	No protein	-	lncRNA	-
ENSMUST00000339208.1	Gm42654-207	511	No protein	-	lncRNA	-
ENSMUST00000339228.1	Gm42654-227	509	No protein	-	lncRNA	-
ENSMUST00000339238.1	Gm42654-237	506	No protein	-	lncRNA	-
ENSMUST00000339244.1	Gm42654-243	505	No protein	-	lncRNA	-
ENSMUST00000339254.1	Gm42654-253	500	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339219.1	Gm42654-218	499	No protein	-	lncRNA	-
ENSMUST00000339234.1	Gm42654-233	493	No protein	-	lncRNA	-
ENSMUST00000339207.1	Gm42654-206	489	No protein	-	lncRNA	-
ENSMUST00000339252.1	Gm42654-251	479	No protein	-	lncRNA	-
ENSMUST00000339218.1	Gm42654-217	478	No protein	-	lncRNA	-
ENSMUST00000339247.1	Gm42654-246	474	No protein	-	lncRNA	-
ENSMUST00000339216.1	Gm42654-215	471	No protein	-	lncRNA	-
ENSMUST00000339231.1	Gm42654-230	469	No protein	-	lncRNA	-
ENSMUST00000339205.1	Gm42654-204	464	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339213.1	Gm42654-212	456	No protein	-	lncRNA	-
ENSMUST00000339241.1	Gm42654-240	456	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339214.1	Gm42654-213	452	No protein	-	lncRNA	-
ENSMUST00000339235.1	Gm42654-234	449	No protein	-	lncRNA	-
ENSMUST00000339212.1	Gm42654-211	440	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339246.1	Gm42654-245	433	No protein	-	lncRNA	-
ENSMUST00000339239.1	Gm42654-238	431	No protein	-	lncRNA	-
ENSMUST00000339224.1	Gm42654-223	425	No protein	-	lncRNA	-
ENSMUST00000339237.1	Gm42654-236	424	No protein	-	lncRNA	-
ENSMUST00000339236.1	Gm42654-235	423	No protein	-	lncRNA	-
ENSMUST00000339248.1	Gm42654-247	421	No protein	-	lncRNA	-
ENSMUST00000339221.1	Gm42654-220	418	No protein	-	lncRNA	-
ENSMUST00000339243.1	Gm42654-242	418	No protein	-	lncRNA	-
ENSMUST00000339206.1	Gm42654-205	417	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000339251.1	Gm42654-250	411	No protein	-	lncRNA	-
ENSMUST00000339232.1	Gm42654-231	409	No protein	-	lncRNA	-
ENSMUST00000339250.1	Gm42654-249	409	No protein	-	lncRNA	-
ENSMUST00000339233.1	Gm42654-232	407	No protein	-	lncRNA	-
ENSMUST00000339210.1	Gm42654-209	398	No protein	-	lncRNA	-
ENSMUST00000339226.1	Gm42654-225	387	No protein	-	lncRNA	-
ENSMUST00000339223.1	Gm42654-222	380	No protein	-	lncRNA	-
ENSMUST00000339211.1	Gm42654-210	377	No protein	-	lncRNA	-
ENSMUST00000339209.1	Gm42654-208	376	No protein	-	lncRNA	-
ENSMUST00000339222.1	Gm42654-221	374	No protein	-	lncRNA	-
ENSMUST00000339215.1	Gm42654-214	373	No protein	-	lncRNA	-
ENSMUST00000339249.1	Gm42654-248	341	No protein	-	lncRNA	-

Gene: Gm42654 ENSMUSG00000107141

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Gene: Gm42654 ENSMUSG00000107141

Summary

About Us

Get help

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