Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Gene: Gm28563 ENSMUSG00000106812

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Description

predicted gene 28563 [Source:MGI Symbol;Acc:MGI:5579269]

Location

Chromosome 5: 118,534,462-118,551,615 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 12 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000349172.1	Gm28563-202	779	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000349174.1	Gm28563-204	1679	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000349173.1	Gm28563-203	1379	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000349175.1	Gm28563-205	899	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000201179.3	Gm28563-201	890	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000349179.1	Gm28563-209	801	No protein	-	lncRNA		-
ENSMUST00000349182.1	Gm28563-212	477	No protein	-	lncRNA		-
ENSMUST00000349180.1	Gm28563-210	475	No protein	-	lncRNA		-
ENSMUST00000349181.1	Gm28563-211	441	No protein	-	lncRNA		-
ENSMUST00000349178.1	Gm28563-208	372	No protein	-	lncRNA		-
ENSMUST00000349176.1	Gm28563-206	348	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000349177.1	Gm28563-207	319	No protein	-	lncRNA		-

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Summary

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