Gene: Gm43838 ENSMUSG00000105730

Description

predicted gene 43838 [Source:MGI Symbol;Acc:MGI:5663975]

Location

Chromosome 5: 64,517,664-64,665,195 forward strand.

GRCm39:CM000998.3

About this gene

This gene has 81 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000371383.1	Gm43838-209	2401	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371611.1	Gm43838-224	2801	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371606.1	Gm43838-221	2586	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371609.1	Gm43838-223	2572	No protein	-	lncRNA	-
ENSMUST00000371605.1	Gm43838-220	2481	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371607.1	Gm43838-222	2168	No protein	-	lncRNA	-
ENSMUST00000371384.1	Gm43838-210	2018	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245593.2	Gm43838-208	1854	No protein	-	lncRNA	-
ENSMUST00000371390.1	Gm43838-216	1807	No protein	-	lncRNA	-
ENSMUST00000371618.1	Gm43838-231	1690	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000244781.1	Gm43838-207	1675	No protein	-	lncRNA	-
ENSMUST00000371388.1	Gm43838-214	1637	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371613.1	Gm43838-226	1630	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371389.1	Gm43838-215	1613	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371385.1	Gm43838-211	1599	No protein	-	lncRNA	-
ENSMUST00000371923.1	Gm43838-271	1544	No protein	-	lncRNA	-
ENSMUST00000371902.1	Gm43838-250	1444	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371386.1	Gm43838-212	1367	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371922.1	Gm43838-270	1313	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371391.1	Gm43838-217	1269	No protein	-	lncRNA	-
ENSMUST00000371901.1	Gm43838-249	1257	No protein	-	lncRNA	-
ENSMUST00000371387.1	Gm43838-213	1235	No protein	-	lncRNA	-
ENSMUST00000371915.1	Gm43838-263	1192	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371900.1	Gm43838-248	1163	No protein	-	lncRNA	-
ENSMUST00000371907.1	Gm43838-255	1134	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000196527.6	Gm43838-202	1125	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000371603.1	Gm43838-218	1123	No protein	-	lncRNA	-
ENSMUST00000371604.1	Gm43838-219	1118	No protein	-	lncRNA	-
ENSMUST00000371615.1	Gm43838-228	1018	No protein	-	lncRNA	-
ENSMUST00000371921.1	Gm43838-269	993	No protein	-	lncRNA	-
ENSMUST00000371916.1	Gm43838-264	950	No protein	-	lncRNA	-
ENSMUST00000371917.1	Gm43838-265	946	No protein	-	lncRNA	-
ENSMUST00000371616.1	Gm43838-229	860	No protein	-	lncRNA	-
ENSMUST00000371919.1	Gm43838-267	854	No protein	-	lncRNA	-
ENSMUST00000371924.1	Gm43838-272	835	No protein	-	lncRNA	-
ENSMUST00000371905.1	Gm43838-253	825	No protein	-	lncRNA	-
ENSMUST00000371926.1	Gm43838-274	824	No protein	-	lncRNA	-
ENSMUST00000371619.1	Gm43838-232	811	No protein	-	lncRNA	-
ENSMUST00000371904.1	Gm43838-252	802	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371897.1	Gm43838-245	788	No protein	-	lncRNA	-
ENSMUST00000371893.1	Gm43838-241	765	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371920.1	Gm43838-268	761	No protein	-	lncRNA	-
ENSMUST00000371929.1	Gm43838-277	731	No protein	-	lncRNA	-
ENSMUST00000371895.1	Gm43838-243	730	No protein	-	lncRNA	-
ENSMUST00000371620.1	Gm43838-233	717	No protein	-	lncRNA	-
ENSMUST00000371903.1	Gm43838-251	714	No protein	-	lncRNA	-
ENSMUST00000196829.2	Gm43838-203	712	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000371617.1	Gm43838-230	709	No protein	-	lncRNA	-
ENSMUST00000371925.1	Gm43838-273	705	No protein	-	lncRNA	-
ENSMUST00000200615.3	Gm43838-206	671	No protein	-	lncRNA	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000200306.2	Gm43838-205	668	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000371906.1	Gm43838-254	666	No protein	-	lncRNA	-
ENSMUST00000371909.1	Gm43838-257	656	No protein	-	lncRNA	-
ENSMUST00000371894.1	Gm43838-242	646	No protein	-	lncRNA	-
ENSMUST00000371614.1	Gm43838-227	646	No protein	-	lncRNA	-
ENSMUST00000371914.1	Gm43838-262	604	No protein	-	lncRNA	-
ENSMUST00000371896.1	Gm43838-244	595	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371910.1	Gm43838-258	585	No protein	-	lncRNA	-
ENSMUST00000371930.1	Gm43838-278	575	No protein	-	lncRNA	-
ENSMUST00000196357.3	Gm43838-201	553	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000373077.1	Gm43838-280	549	No protein	-	lncRNA	-
ENSMUST00000199362.2	Gm43838-204	541	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000371890.1	Gm43838-238	512	No protein	-	lncRNA	-
ENSMUST00000371887.1	Gm43838-235	509	No protein	-	lncRNA	-
ENSMUST00000371898.1	Gm43838-246	504	No protein	-	lncRNA	-
ENSMUST00000371889.1	Gm43838-237	503	No protein	-	lncRNA	-
ENSMUST00000373078.1	Gm43838-281	496	No protein	-	lncRNA	-
ENSMUST00000371886.1	Gm43838-234	490	No protein	-	lncRNA	-
ENSMUST00000371891.1	Gm43838-239	471	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371908.1	Gm43838-256	464	No protein	-	lncRNA	-
ENSMUST00000371899.1	Gm43838-247	451	No protein	-	lncRNA	-
ENSMUST00000371931.1	Gm43838-279	450	No protein	-	lncRNA	-
ENSMUST00000371911.1	Gm43838-259	435	No protein	-	lncRNA	-
ENSMUST00000371888.1	Gm43838-236	423	No protein	-	lncRNA	-
ENSMUST00000371892.1	Gm43838-240	404	No protein	-	lncRNA	-
ENSMUST00000371918.1	Gm43838-266	402	No protein	-	lncRNA	-
ENSMUST00000371927.1	Gm43838-275	400	No protein	-	lncRNA	-
ENSMUST00000371928.1	Gm43838-276	386	No protein	-	lncRNA	-
ENSMUST00000371612.1	Gm43838-225	371	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000371912.1	Gm43838-260	358	No protein	-	lncRNA	-
ENSMUST00000371913.1	Gm43838-261	284	No protein	-	lncRNA	-

Gene: Gm43838 ENSMUSG00000105730

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Gene: Gm43838 ENSMUSG00000105730

Summary

About Us

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