Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
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Ontologies
- GO: Anatomical entity
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Gene: 2310043O21Rik ENSMUSG00000102106

.

Description

RIKEN cDNA 2310043O21 gene [Source:MGI Symbol;Acc:MGI:1916929]

Location

Chromosome 15: 38,549,561-38,602,632 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000380761.1	2310043O21Rik-202	539	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000380765.1	2310043O21Rik-206	1281	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380769.1	2310043O21Rik-210	728	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380772.1	2310043O21Rik-213	712	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380766.1	2310043O21Rik-207	711	No protein	-	lncRNA		-
ENSMUST00000380778.1	2310043O21Rik-219	675	No protein	-	lncRNA		-
ENSMUST00000380776.1	2310043O21Rik-217	671	No protein	-	lncRNA		-
ENSMUST00000380777.1	2310043O21Rik-218	637	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380775.1	2310043O21Rik-216	623	No protein	-	lncRNA		-
ENSMUST00000185323.3	2310043O21Rik-201	622	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000380774.1	2310043O21Rik-215	607	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380763.1	2310043O21Rik-204	589	No protein	-	lncRNA		-
ENSMUST00000380762.1	2310043O21Rik-203	571	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000380771.1	2310043O21Rik-212	546	No protein	-	lncRNA		-
ENSMUST00000380767.1	2310043O21Rik-208	526	No protein	-	lncRNA		-
ENSMUST00000380770.1	2310043O21Rik-211	519	No protein	-	lncRNA		-
ENSMUST00000380768.1	2310043O21Rik-209	480	No protein	-	lncRNA		-
ENSMUST00000380764.1	2310043O21Rik-205	436	No protein	-	lncRNA		-
ENSMUST00000380773.1	2310043O21Rik-214	327	No protein	-	lncRNA		-

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Summary

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